Fill Class Documentation#
Package: sc.fiji.snt
Defines a filled structure.
Fields#
- distanceThreshold
float No description available.
- metric
Any No description available.
- spacing_units
str No description available.
- x_spacing
float No description available.
- y_spacing
float No description available.
- z_spacing
float No description available.
Methods#
Getters Methods#
- getEstimatedMeanRadius()#
Returns the estimated mean radius of the fill, assuming a cylindric shape
- getMetric()#
- getNodeList()#
Returns the list of nodes in the filled structure.
- getSourcePaths()#
Returns the set of source paths for the filled structure.
- getSourcePathsStringHuman()#
- getSourcePathsStringMachine()#
- getThreshold()#
- getVolume()#
Returns the Fill volume. It assumes that the volume is just the number of sub-threshold nodes multiplied by x_spacing * y_spacing * z_spacing.
Setters Methods#
- setMetric(SNT$CostType)#
Sets the cost metric for the filled structure.
- setSourcePaths(Path;)#
Sets the source paths for the filled structure using a set of paths.
- setSpacing(double, double, double, String)#
- setThreshold(double)#
Sets the distance threshold for the filled structure.
I/O Operations Methods#
- writeNodesXML(PrintWriter)#
- writeXML(PrintWriter, int)#
Other Methods#
- add(int, int, int, double, int, boolean)#
Adds a node to the filled structure.